Generic Port — NodePit

There are 5216 nodes that can be used as predessesor for a node with an input port of type

Recalibration of sequencing quality scores.

Calls germline SNPs and indels via local re-assembly of haplotypes.

Computes the most likely genotype combination and phases trios and parent/child pairs.

Realignment around insertions and deletions.

Selects a subset of variants from a larger callset.

Calls SNPs and indels.

Filters variant calls based on INFO and FORMAT annotations.

Performs joint genotyping on gVCF files produced by HaplotypeCaller.

This node merges two VCF files into one combined VCF file.

Combines VCF records from different sources.

Node Connectivity