URIPortObject managed by FileStore

Finds mass spectrometric peaks in profile mass spectra.

Merges spectra (each MS level separately), increasing S/N ratios.

Assay library generation from DDA data (Metabolomics)

Assay library generation from a SIRIUS project directory (Metabolomics)

Correlate precursor masstraces with fragment ion masstraces in SWATH maps based on their elution profile.

MRMMapper maps measured chromatograms (mzML) and the transitions used (TraML)

Util which can be used to evaluate labeled pair ratios on MRM features.

Picks peaks in SRM/MRM chromatograms.

Picks peaks and finds features in an SWATH-MS or SRM experiment.

Generates assays according to different models for a specific TraML

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