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Generic Workflow Nodes for KNIME: NgsToolbox version by Freie Universitaet Berlin, Universitaet Tuebingen, and the NgsToolbox Team

Input Ports

Input Reference File. [fa,fasta]
Input Index File. [bwaidx]
Reads Input Reads File. [fa,fasta,fq,fastq]

Output Ports

Output SAM file. [sam]


BwaSamSE Std Output
The text sent to standard out during the execution of BwaSamSE.
BwaSamSE Error Output
The text sent to standard error during the execution of BwaSamSE. (If it appears in gray, it's the output of a previously failing run which is preserved for your trouble shooting.)



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