This program is a sub-routine of SeqAn-Flexbar (a reimplementation of the original flexbar ) and can be used for quality controlling of reads.
 Dodt, M.; Roehr, J.T.; Ahmed, R.; Dieterich, C. FLEXBAR—Flexible Barcode and Adapter Processing for Next-Generation Sequencing Platforms. Biology 2012, 1, 895-905.
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