Generic Workflow Nodes for KNIME: SeqAn version 188.8.131.52707261654 by Freie Universitaet Berlin, Universitaet Tuebingen, and the SeqAn Team
INSEGT is a tool to analyze alignments of RNA-Seq reads (single-end or paired-end) by using gene-annotations.
Input to INSEGT is a SAM file containing the alignments and a file containing the annotations of the reference genome, either in GFF or GTF format.
To use this node in KNIME, install Generic Workflow Nodes for KNIME: SeqAn from the following update site:
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