LabeledEval

Evaluation tool for isotope-labeled quantitation experiments.

Web Documentation for LabeledEval

Options

version
Version of the tool that generated this parameters file.
rt_tol
Maximum allowed retention time deviation
mz_tol
Maximum allowed m/z deviation (divided by charge)
log
Name of log file (created only when specified)
debug
Sets the debug level
threads
Sets the number of threads allowed to be used by the TOPP tool
no_progress
Disables progress logging to command line
force
Overrides tool-specific checks
test
Enables the test mode (needed for internal use only)

Input Ports

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Feature result file [featureXML]
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Expected result file. [consensusXML]

Output Ports

This node has no output ports

Popular Predecessors

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Popular Successors

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Views

LabeledEval Std Output
The text sent to standard out during the execution of LabeledEval.
LabeledEval Error Output
The text sent to standard error during the execution of LabeledEval. (If it appears in gray, it's the output of a previously failing run which is preserved for your trouble shooting.)

Workflows

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Links

Developers

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Installation

To use this node in KNIME, install the extension OpenMS from the below update site following our NodePit Product and Node Installation Guide:

v5.2

A zipped version of the software site can be downloaded here.

Plugin provider: Freie Universitaet Berlin, Universitaet Tuebingen, ZIB (GKN-Team) and the OpenMS Team
Plugin version: 3.0.0.202307112039
On NodePit since: 2023-12-06
Last update: 2024-04-25
KNIME versions: v5.2, v5.1, v4.7, v4.6, v4.5, v4.4, v4.3, v4.2, v4.1, v4.0, v3.7, v3.6

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