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XLS Model Reader

Node extensions for KNIME Workbench version 1.0.0.202102171221 by BfR

Imports models from a Microsoft Excel (XLS) file into PMM-Lab.

Options

XLS File
Specify the XLS file.
Sheet
If the file contains several spreadsheets the desired one can be selected here.
Literature
Assign a reference from the internal database to the time series. In order choose your own reference this needs to be entered manually by clicking on the green '+' button. Another option is to enter the database via 'PMM-Lab' -> 'Open DB GUI...' where also *.ris files can be imported.
Models
Select a model from the internal database and assign to its parameters (left) the appropriate Excel columns (drop-down menus on the right).
Organism / Matrix
Choose a column from the XLS file and assign to every organism / matrix one equivalent from the internal database.
XLS Column -> PMM-Lab assignments
Assign to every column header from the Excel sheet (on the left) a column from the database table 'Test conditions' via the drop-down menus (on the right). For time and environmental conditions (e.g. temperature) units need to be assigned.

Output Ports

Icon
Imported models

Best Friends (Outgoing)

Installation

To use this node in KNIME, install PMM Nodes from the following update site:

KNIME 4.3

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Developers

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