Upload LiveDesign Protocols

Upload a set of protocols to LiveDesign
Requires Workflow Credentials or 'Credentials Input' Quick Form node with name: ld_credentials
Backend implementation
LiveDesign_admin.py from KNIME scripts

Options

LiveDesign host

Specify a LiveDesign host to upload a set of protocols. If "From the Preferences" is selected, then the value set in Preferences is taken.

Column containing protocol filepath

Select the column that contains the path to the protocol files to be uploaded.

Column containing New name (optional)

Select a column that contains new names for the uploaded protocols. This is optional and if no column is selected, then the name in the protocol file is used.

Schordinger Suite

Specify the Schrodinger Suite (on LiveDesign host) to be used for this Model. This will be the value of the 'SCHRODINGER' MODEL DATA in the Model. The format could be an absolute path of the SCHRODINGER on the LiveDesign host or simply the release year like '2019-3'. If "From the Preferences" is selected, then the value set in Preferences is taken. If "Same as current" is selected, the current Schroinger release version will be used. If left empty, the value in Preferences will be taken. If it is empty in Preferences too, then current Schrodinger release version will be used.

PyMOL Location

Specify the PyMOL executable location on LiveDesign instance.

Extra arguments

Specify any extra arguments for the LiveDesign_admin.py script. To upload KNIME generic protocols and any non-KNIME protocol, '-standard' option should be specified. To upload KNIME dedicated protocols, '-standard' should not be specified. By default -standard option is specified.

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Workflows

• Deploy protocols and models on customer machineKNIME Hub
• Model administrationKNIME Hub

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Developers