RNA-Seq

This category contains 5 nodes.

This node uses the DESeq package to test for differential expression based on a model using the negative binomial distribution.

Assessing differential expression in comparative RNA-seq experiments.

The FeatureCountsMerger can be used to merge the results of multiple feature count runs.

The FilterLowExpressed node can be used to filter low expressed genes before differential expression analysis.

This node can detect differential expressed genes using the limma package.