Enrichment Analyzer 

Tests for enrichment of a set of observation was enriched with certain ontoloy-classes.

MapStatistics 

Extract extended statistics on the features of a map for quality control.

FSK Editor Deprecated

Edit the scripts in an FSK object

MRMPairFinder 

Util which can be used to evaluate labeled pair ratios on MRM features.

FSK Joiner Deprecated

Joiner of FSK objects

IDMassAccuracy 

Calculates a distribution of the mass error from given mass spectra and IDs.

FeatureFinderMetabo 

Assembles metabolite features from centroided (LC-)MS data using the mass trace approach.

OpenSwathRTNormalizer 

Generate a transformation file on how to transform the RT space into the normalized space given a description of RT peptides and their normalized retention […]