Pick List Generator

This a component to generate pick lists for the Echo acoustic dispenser to use in preparing destination microplates for single-point primary assays.

The input is a table of compound library, and it must have at least a column of compound name, a column of source plate ID or barcode, and a column of source well.

The user needs to select the column containing the compound name, plate barcode and well location. In addition, the user can choose whether the compounds from the library (source plate) can be sorted by rows or by columns onto the destination plate.

The user can specify the number of compounds per plate and the number of plates per batch run. The component then divides the library into several files (named PickListBatch(number).csv) and saves into a folder specified by the user. The user can create a new folder whilst selecting the folder by clicking Browse and then Create New Folder.

Options

Sample ID column

Select column containing sample IDs

Source plate barcode column

Select column containing source plate barcode

Source well column

Select column containing source well

Number of compounds per plate

Set the number of compounds per plate, excluding controls

Number of plates per batch

Set the number of plates per batch

Destination folder

Destination folder for which picklist files are to be generated

Source compound sorting method

Choose method to sort the source compounds either by column or by row

Nodes

• Column Selection Configuration4 ×
• String Manipulation (Variable)4 ×
• Variable to Table Row4 ×
• Rule Engine Variable3 ×
• Transpose3 ×
• Show all 43 nodes

Extensions

• FeatureKNIME Base nodes
• FeatureKNIME Data Generation
• FeatureKNIME Javasnippet
• FeatureKNIME Math Expression (JEP)
• FeatureKNIME Quick Forms

Links

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