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PubMed Literature Search

This workflow is a small web application for searching publications in PubMed in a certain date range. The consumer can simply enter a query and the date range and the matching publication titles and authors will be fetched from PubMed. In a second view the consumer can select if they want to inspect the publication by search for an author or search by year/month. If search for an author is selected the consumer can use the autocomplete input to enter possible author names and all publications contain this name are shown. If search by year/month is selected, the consumer gets first an overview of the publications per year and can then select a certain year. The following view shows then the distribution of publication per month for the selected year.

PubMed Literature Search/Exploration in WebPortalThis workflow is a small web application for searching publications in PubMed in a certain date range. The consumer can simply enter a query and the date range and the matching publication titles and authors will be fetched from PubMed.The consumer can then select if they want to inspect the publication by search for a author or search by year/month. String Manipulation(Variable) Document Grabber Document DataExtractor Enter Search Termand Date Range Column Filter Extract Date&TimeFields Sorter Yearly View Missing Value Monthly View Cell Splitter Unpivoting Column Filter Column Rename View publicationlist Search for author Chose furtherfiltering PubMed Literature Search/Exploration in WebPortalThis workflow is a small web application for searching publications in PubMed in a certain date range. The consumer can simply enter a query and the date range and the matching publication titles and authors will be fetched from PubMed.The consumer can then select if they want to inspect the publication by search for a author or search by year/month. String Manipulation(Variable) Document Grabber Document DataExtractor Enter Search Termand Date Range Column Filter Extract Date&TimeFields Sorter Yearly View Missing Value Monthly View Cell Splitter Unpivoting Column Filter Column Rename View publicationlist Search for author Chose furtherfiltering

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To use this workflow in KNIME, download it from the below URL and open it in KNIME:

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Created by: janinamothes
Created at: 2020-11-22
On NodePit since: 2020-12-10
Last update: 2024-04-27
Created with KNIME version: v4.2.3
Tags: time seriesPubMedauthorLife Science

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