Table — NodePit

There are 3984 nodes that can be used as predessesor for a node with an input port of type

KNIME node to retrieve a list of all co-crystallized ligands (optionally for a given set of kinase IDs) from KLIFS.

KNIME node to retrieve a list of structure IDs from KLIFS of structures in complex with specific kinases (kinase IDs) or ligands (ligand IDs).

KNIME node to map a set of 4-letter PDB-codes to structure IDs from KLIFS.

KNIME node to retrieve (a part of) a kinase-ligand complex as a 3D structure in MOL2/PDB format from KLIFS.

Find Kripo fragment information by their identifier.

Retrieve Kripo pharmacophores.

Find similar fragments to queries based on the Kripo fingerprint similarity matrix.

Node to view ligands and proteins

Node to view ligands in 3D

Node to view pharmacophores in 3D

Node Connectivity