Node Connectivity

There are 2860 nodes that can be used as successor for a node with an output port of type Table.

Interaction Fingerprint Decomposer 

KNIME node for decomposing an interaction fingerprint into a more human readable overview of interactions (including types) per structure.

Interaction Fingerprint Retriever 

KNIME node to retrieve the interaction fingerprint of specific kinase-ligand complexes from KLIFS.

Ligands Overview Retriever 

KNIME node to retrieve a list of all co-crystallized ligands (optionally for a given set of kinase IDs) from KLIFS.

Structures Overview Retriever 

KNIME node to retrieve a list of structure IDs from KLIFS of structures in complex with specific kinases (kinase IDs) or ligands (ligand IDs).

Structures PDB Mapper 

KNIME node to map a set of 4-letter PDB-codes to structure IDs from KLIFS.

Structures Retriever 

KNIME node to retrieve (a part of) a kinase-ligand complex as a 3D structure in MOL2/PDB format from KLIFS.

Fragment information 

Find Kripo fragment information by their identifier.

Pharmacophore 

Retrieve Kripo pharmacophores.

Similar fragments 

Find similar fragments to queries based on the Kripo fingerprint similarity matrix.

Ligands and Proteins Viewer 

Node to view ligands and proteins