Targeted Experiments and OpenSWATH
/community/OpenMS/Targeted Experiments and OpenSWATH
This category contains 17 nodes.
OpenSwathDecoyGenerator
Generates decoys according to different models for a specific TraML
OpenSwathDIAPreScoring
Scoring spectra using the DIA scores.
OpenSwathFeatureXMLToTSV
Converts a featureXML to a mProphet tsv.
OpenSwathFileSplitter
Splits SWATH files into n files, each containing one window.
OpenSwathRewriteToFeatureXML
Combines featureXML and mProphet tsv to FDR filtered featureXML.
OpenSwathRTNormalizer
Generate a transformation file on how to transform the RT space into the normalized space given a description of RT peptides and their normalized retention […]
OpenSwathWorkflow
Complete workflow to run OpenSWATH