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ID Processing

/community/OpenMS/ID Processing

This category contains 11 nodes.

ConsensusID

Computes a consensus of peptide identifications of several identification engines.

FalseDiscoveryRate

Estimates the false discovery rate on peptide and protein level using decoy searches.

IDConflictResolver

Resolves ambiguous annotations of features with peptide identifications

IDFileConverter

Converts identification engine file formats.

IDFilter

Filters results from protein or peptide identification engines based on different criteria.

IDMapper

Assigns protein/peptide identifications to features or consensus features.

IDPosteriorErrorProbability

Estimates probabilities for incorrectly assigned peptide sequences and a set of search engine scores using a mixture model.

IDRTCalibration

Can be used to calibrate RTs of peptide hits linearly to standards.

PeptideIndexer

Refreshes the protein references for all peptide hits.

PhosphoScoring

Scores potential phosphorylation sites in order to localize the most probable sites.