Prints the content of OpenMS' enzyme and modification databases to TSV
Combines featureXML and mProphet tsv to FDR filtered featureXML.
Saves model formulas to the internal database
Generates assays according to different models for a specific TraML
Groups corresponding isotope-labeled features in a feature map.
DEPRECATED. NOT WORKING ANYMORE. Download molecular structures from ChemSpider.com.
Converts RDKit molecules into string based molecule representations (SDF or Smiles).
Calculates the best RMSD value for different conformers of the same RDKit molecules and filters them based on a threshold value.
MRMMapper maps measured chromatograms (mzML) and the transitions used (TraML)
Reads ComBase CSV files
Do you have feedback, questions, comments about NodePit, want to support this platform, or want your own nodes or workflows listed here as well? Do you think, the search results could be improved or something is missing? Then please get in touch! Alternatively, you can send us an email to mail@nodepit.com.
Please note that this is only about NodePit. We do not provide general support for KNIME — please use the KNIME forums instead.