Example Read HDF5 Data

Demo developed in respose to a forum query showing the use of a Python Script to read data from an HDF5 file and present the embeded data on multiple ouputs.

A configuration dialogue is provided to select the HDF5.

Requires h5py and Pandas Python packages.

Options

HDF5 To Read

HDF5 containing single-cell transcriptomics data.

Nodes

• Component Input1 ×
• Component Output1 ×
• Conda Environment Propagation1 ×
• Local File Browser Configuration1 ×
• Merge Variables1 ×
• Python Script1 ×

Extensions

• FeatureKNIME Base nodes
• FeatureKNIME Conda Integration
• FeatureKNIME Quick Forms

Links

• No links available