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This directory contains 13 workflows.

ProteomicsLFQ configuration 

Component to visually set the parameters for the ProteomicsLFQ node e.g. on the WebPortal.

PSM Rescoring 

Performs rescoring of peptide spectrum matches based on score distributions of targets and decoys (IDPEP) or multiple peptide features (Percolator). Output […]

Search Engine Combination 

Run a combination of peptide search engines. They will compare theoretical spectra from a protein database to experimental spectra in an mzML.