There are 3696 nodes that can be used as predessesor
for a node with an input port of type Table.
Creates a Gaussian mixture model by looking at the annotations values over a high quality subset of the input call set and then evaluate all input variants.
This node uses the DESeq package to test for differential expression based on a model using the negative binomial distribution.
Assessing differential expression in comparative RNA-seq experiments.
The FeatureCountsMerger can be used to merge the results of multiple feature count runs.
The FilterLowExpressed node can be used to filter low expressed genes before differential expression analysis.
This node can detect differential expressed genes using the limma package.
bcftools — utilities for manipulating VCFs and BCFs.
Provides access to many functionalities of SAMtools.
featureCounts: an efficient general purpose program for assigning sequence reads to genomic features.
This node can be used to merge statistics of the featureCounts node.
Do you have feedback, questions, comments about NodePit, want to support this platform, or want your own nodes or workflows listed here as well? Do you think, the search results could be improved or something is missing? Then please get in touch! Alternatively, you can send us an email to mail@nodepit.com.
Please note that this is only about NodePit. We do not provide general support for KNIME — please use the KNIME forums instead.