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GATK

This category contains 14 nodes.

GenotypeGVCFs 

Performs joint genotyping on gVCF files produced by HaplotypeCaller.

MergeTwoVCFs 

This node merges two VCF files into one combined VCF file.

VCFMerger 

Combines VCF records from different sources.

VQSR 

Creates a Gaussian mixture model by looking at the annotations values over a high quality subset of the input call set and then evaluate all input variants.